{"id":890,"date":"2021-02-13T14:27:56","date_gmt":"2021-02-13T14:27:56","guid":{"rendered":"https:\/\/sites.krieger.jhu.edu\/greenberg\/?page_id=890"},"modified":"2025-09-19T15:29:46","modified_gmt":"2025-09-19T15:29:46","slug":"2021-present","status":"publish","type":"page","link":"https:\/\/sites.krieger.jhu.edu\/greenberg\/publications\/2021-present\/","title":{"rendered":"2021 &#8211; present"},"content":{"rendered":"\n<p>223. Identifying Poly(ADP-ribose)-Binding Proteins With Photoaffinity-Based Proteomics. Dasovich, M.; Beckett, M. Q.; Bailey, S.; Ong, S.; Greenberg, M. M.; Leung, A. K. L. <em>J. Am. Chem. Soc. <\/em><strong>2021<\/strong>, <em>143<\/em>, 3037-3042.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; <\/p>\n\n\n\n<p>224. Selective Inhibition of DNA Polymerase b by a Covalent Inhibitor. Yuhas, S. C.; Laverty, D. J.; Lee, H.; Greenberg, M. M. <em>J. Am. Chem. Soc. <\/em><strong>2021<\/strong>, <em>143<\/em>, 8099-8107.<\/p>\n\n\n\n<p>225. Sequence Context Effects of Replication of Fapy\u2022dG in Three Mutational Hot Spot Sequences of the p53 Gene in Human Cells. Bacurio, J. H.; Yang, H.; Naldiga, S.; Powell, B. V.; Ryan, B. J.; Freudenthal, B. D.; Greenberg, M. M. Basu, A. K. <em>DNA Repair <\/em><strong>2021<\/strong>, <em>108<\/em>, 103213.<\/p>\n\n\n\n<p>226. Protein Domain Specific Covalent Inhibition of Human DNA Polymerase b. Yuhas, S. C.; Majumdar, A.; Greenberg, M. M. <em>ChemBioChem<\/em><strong> <\/strong><strong>2021<\/strong>, <em>22<\/em>, 2619-2623. Designated by the editor as a <em>Very Important Paper<\/em>.<\/p>\n\n\n\n<p>227. Suppression of DNA Polymerase b Activity is Synthetically Lethal in BRCA1-Deficient Cells. &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Yuhas, S. C.; Mishra, A.; DeWeese, T. L.; Greenberg, M. M. <em>ACS Chem. Biol<\/em>. <em>ACS Chem. Biol<\/em>. <strong>2021<\/strong>, <em>16<\/em>, 1339-1343.<\/p>\n\n\n\n<p>228. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jacs.1c06425\">Reactivity and DNA Damage by Independently Generated 2&#8242;-Deoxycytidin-<em>N<\/em>4-yl Radical. <\/a>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Peng, H.; Jialong, J.; Mortimer, I. P.; Zehan, M.; Su, H.; Greenberg, M. M. <em>J. Am. Chem. Soc. <\/em><strong>2021<\/strong>, <em>143<\/em>, 14738-14747.<\/p>\n\n\n\n<p>229. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jacs.2c02880\">Intracellular Formation of A DNA Damage-Induced, Histone Post-translational Modification Following Bleomycin Treatment. <\/a>Jacinto, M. P.; Fried, S. D.; Greenberg, M. M. Jacinto, M. P<em>.;<\/em> Fried, S. D.; Greenberg, M. M.  <em>J. Am. Chem. Soc.<\/em> <strong>2022<\/strong>, <em>144<\/em>, 7600-7605.<\/p>\n\n\n\n<p>230. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jacs.2c00193\">Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and During DNA Replication.<\/a> Ryan, B. J.; Yang, H.; Bacurio, J.H.; Smith, M. R.; Basu, A. K.; Greenberg,M. M.; Freudenthal, B. D. <em><em>J. Am. Chem. Soc. <\/em><strong>2022<\/strong>, <em>144<\/em>, <\/em>8054-8065.<\/p>\n\n\n\n<p>231. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.biochem.2c00342\">Local Alteration of Ionic Strength in a Nucleosome Core Particle and its Effect on <em>N<\/em>7-Methyl-2\u2019-deoxyguanosine Depurination.<\/a> Wen, T.; Yang, K.; Greenberg, M. M. <em>Biochemistry <\/em><strong>2022<\/strong>, <em>61<\/em>, 2221-2228.<\/p>\n\n\n\n<p>232. <a href=\"https:\/\/chemistry-europe.onlinelibrary.wiley.com\/doi\/full\/10.1002\/cbic.202200373\">Covalent Modification of Bromodomain Proteins by Peptides Containing a DNA Damage-Induced, Histone Post-Translational Modification.<\/a> Jacinto, M. P.; Heidenreich, D.; M\u00fcller, S.; Greenberg, M. M. <em>ChemBioChem <\/em><strong>2022<\/strong>, <em>23<\/em>, e202200373.<\/p>\n\n\n\n<p>233. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.biochem.3c00007\">Histone Deacetylase 1 Inhibition by Peptides Containing a DNA Damage-Induced, Non-enzymatic, Histone Covalent Modification.<\/a> Jacinto, M. P.; Greenberg, M. M. <em>Biochemistry <\/em><strong>2023<\/strong>, <em>62<\/em>, 1388-1393. <\/p>\n\n\n\n<p>234. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.joc.3c00646\">8-Oxo-2\u2019-deoxyguanosine Replication in Mutational Hot Spot Sequences of the <em>p53<\/em> Gene in Human Cells is Less Mutagenic Than That of the Corresponding Formamidopyrimidine.<\/a> Stanio, S.; Bacurio, J. H.; Yang, H.; Greenberg, M. M.; Basu, A. K. <em>Chem. Res. Toxicol. <\/em><strong>2023<\/strong>, <em>36<\/em>, 782-789.<\/p>\n\n\n\n<p>235. Photochemical and Single Electron Transfer Generation of 2\u00a2-Deoxycytidin-N4-yl Radical From Oxime Esters. Peng, H.; Vu, S.; Retes, P.; Ward, S.; Kumar, A.; Sevilla, M. D.; Adhikary, A.; Greenberg, M. M. <em>J. Org. Chem.<\/em> <strong>2023<\/strong>, <em>88<\/em>, 7381-7390.<\/p>\n\n\n\n<p><a href=\"http:\/\/doi.org\/10.1021\/acschembio.3c00118\">236. Deoxyguanosine-Linked Bifunctional Inhibitor of SAMHD1 dNTPase Activity and Nucleic Acid Binding. Egleston, M.; Dong, L; Howlader, A. H.; Bhat, S.; Orris, B.; Bianchet, M.; Greenberg, M. M.; Stivers, J. T. <em>ACS Chem. Biol.<\/em><strong> 2023<\/strong>, <em>18<\/em>, 2200-2210.<\/a><\/p>\n\n\n\n<p>237. <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1568786423000812\">Synergistic Effects on the Mutagenicity of Tandem Lesions Containing 8-Oxo-7,8-dihydro-2\u02b9-deoxyguanosine or Fapy\u2022dG Flanked by a 3\u02b9 5-Formyl-2\u02b9-deoxyuridine in Human Cells.<\/a> Bacurio, J. H.; Gao, S.; Yang, H.; Basu, A. K.; Greenberg, M. M. <em>DNA Repair <\/em><strong>2023<\/strong>, <em>129<\/em>, 103527.<\/p>\n\n\n\n<p>238. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jacs.3c08135\">DNA-Histone Cross-link Formation via Hole Trapping in Nucleosome Core Particles.<\/a> Wen, T.; Kermarrec, M.; Dumont, E.; Gillet, N.; Greenberg, M. M. <em>J. Am. Chem. Soc. <\/em><strong>2023<\/strong>, <em>145<\/em>, 23702-23714.<\/p>\n\n\n\n<p>239. Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy\u2022dG. Gao, S.; Hou, P.; Oh, J.; Wang, D.; Greenberg, M. M.&nbsp;<em>J. Am. Chem. Soc.&nbsp;<\/em><strong>2024<\/strong>,&nbsp;<em>146<\/em>, 6274-6282.<\/p>\n\n\n\n<p>240. Biochemical and Structural Characterization of Fapy\u2022dG Replication by Human DNA Polymerase&nbsp;b. Gao, S.; Oden, P. N.; Ryan, B. J.; Yang, H.; Freudenthal, B. D.; Greenberg, M. M.&nbsp;<em>Nucleic Acids Res<\/em><strong> <\/strong><strong>2024<\/strong>,&nbsp;<em>52<\/em>, 5392-5405.<\/p>\n\n\n\n<p>241. DNA-Protein Cross-Links With N7-Methyl-2\u2019-deoxyguanosine And Their Contribution To Cytotoxicity. Wen, T.; Zhao, S.; Stingele, J.; Ravanat, J.; Greenberg, M. M.&nbsp;<em>Chem. Res. Toxicol.&nbsp;<\/em><strong>2024<\/strong>,&nbsp;<em>37<\/em>, 814-823.<\/p>\n\n\n\n<p>242. Promoter Dependent RNA Polymerase II Bypass of the Epimerizable DNA Lesion, Fapy\u2022dG and 8-Oxo-2&#8242;-deoxyguanosine. Gao, S.; Tahara, Y.; Kool, E. T.; Greenberg, M. M.&nbsp;<em>Nucleic Acids Res.&nbsp;<\/em><strong>2024<\/strong>,&nbsp;<em>52<\/em>, 7437-7446.<\/p>\n\n\n\n<p>243.&nbsp;<a href=\"https:\/\/doi.org\/10.1016\/j.jbc.2024.107719\">T7 RNA Polymerase Catalyzed Transcription of the Epimerizable DNA Lesion, Fapy\u2022dG and 8-Oxo-2&#8242;-deoxyguanosine.<\/a> &nbsp;Gao, S.; Hou, P.; Wang, D.; Greenberg, M. M.&nbsp;<em>J. Biol. Chem.&nbsp;<\/em><strong>2024<\/strong>,&nbsp;<em>300<\/em>,&nbsp;107719.<\/p>\n\n\n\n<p>244.&nbsp; 8-OxodGuo and Fapy\u2022dG Mutagenicity in&nbsp;<em>Escherichia coli<\/em>&nbsp;Increases Significantly When They are Part of a Tandem Lesion With 5-Formyl-2\u02b9-deoxyuridine. Dasgupta, S.; Gao, S.; Yang, H.; Greenberg, M. M.; Basu, A. K.&nbsp;<em>Chem. Res. Toxicol.<\/em>&nbsp;<strong>2024<\/strong>,&nbsp;<em>37<\/em>, 1445-1452.<\/p>\n\n\n\n<p>245.&nbsp;<a href=\"https:\/\/academic.oup.com\/nar\/article\/53\/13\/gkaf646\/8203454\" data-type=\"link\" data-id=\"https:\/\/academic.oup.com\/nar\/article\/53\/13\/gkaf646\/8203454\">A Human High-Fidelity DNA Polymerase Holoenzyme Has a Wide Range of Lesion Bypass Activities.<\/a> Dannenberg, R. L.; Cardina, J. A.; Washington, H.; Gao, S.; Greenberg, M. M.; Hedglin, M.&nbsp;<em>Nucleic Acids Res.<\/em><strong>2025<\/strong>,&nbsp;<em>53<\/em>, gkaf646.<\/p>\n\n\n\n<p>246. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.biochem.4c00854#Abstract\" data-type=\"link\" data-id=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.biochem.4c00854#Abstract\">Inhibitors of SAMHD1 Obtained From Chemical Tethering to the Guanine Antiviral Acyclovir<\/a>. Egleston, M.; Bhat, S.; Howlader, A. H.; Bianchet, M. A.; Liu, Y.; Lopez Rovira, L. M.; Smith, B.; Greenberg, M. M.; Stivers, J. T.&nbsp;<em>Biochemistry&nbsp;<\/em><strong>2025<\/strong>,&nbsp;<em>64<\/em>, 1109-1120.<\/p>\n\n\n\n<p>247. <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jacs.5c01436\" data-type=\"link\" data-id=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jacs.5c01436\">Uridine Embedded Within DNA is Repaired by Uracil DNA Glycosylase via a Mechanism Distinct From That of RNase H2<\/a>.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Fan, C.; Zhan, X.; Guo, F.; Li, Q.; Lu, K.; Shan, X.; Zhou, Y.; Ren, M.; Greenberg, M. M.; Liu Y.; Zhou, C.&nbsp;<em>J. Am. Chem. Soc.&nbsp;<\/em><strong>2025<\/strong>,&nbsp;<em>147<\/em>, 11574-11583.<\/p>\n\n\n\n<p>248.&nbsp;<a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jacs.5c09293?ref=pdf\">A Chimeric Bis-Electrophile for Selective DNA-Protein Cross-Linking Reveals an Unknown Source of Nitrogen Mustard Cytotoxicity.<\/a> &nbsp;Jiang, X.; Vu, S.; Yu, H.; Greenberg, M. M.&nbsp;<em>J. Am. Chem. Soc.&nbsp;<\/em><strong>2025<\/strong>,&nbsp;<em>147<\/em>, 31839-31848.<\/p>\n\n\n\n<p>\u00a0\u00a0249.\u00a0<a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.joc.5c01529\" data-type=\"link\" data-id=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.joc.5c01529\">Inhibition of DNA Polymerase \u03b2 by a Noncompetitive Inhibitor.<\/a>\u00a0Howlader, A.\u00a0H.; Jiang, X.; Zhou, Z.; Greenberg, M. M.\u00a0<em>J. Org. Chem.\u00a0<\/em><strong>2025<\/strong>,\u00a0<em>90<\/em>, 12849-12859. (PMC: 12431629)\u00a0<em>Selected as a Featured Article in the Journal by the Editors. Featured as an\u00a0<\/em><a href=\"https:\/\/nam02.safelinks.protection.outlook.com\/?url=https%3A%2F%2Fpubs.acs.org%2Fpage%2Fpolicy%2Feditorchoice%2Findex.html&amp;data=05%7C02%7Cmgreenberg%40jhu.edu%7C09e34edfcaeb477c376708dde016bb43%7C9fa4f438b1e6473b803f86f8aedf0dec%7C0%7C0%7C638913110421863233%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&amp;sdata=I0FR1xxx6KvH4RzfDln5Hbkt93PPkB%2F%2BnfHFLcPTEk4%3D&amp;reserved=0\" target=\"_blank\" rel=\"noreferrer noopener\"><em>ACS Editors\\&#8217; Choice<\/em><\/a><em>. The ACS Editors\\&#8217; Choice initiative highlights one article each day that is chosen from the entire ACS portfolio.<\/em><\/p>\n\n\n\n\n","protected":false},"excerpt":{"rendered":"<p>223. Identifying Poly(ADP-ribose)-Binding Proteins With Photoaffinity-Based Proteomics. Dasovich, M.; Beckett, M. Q.; Bailey, S.; Ong, S.; Greenberg, M. M.; Leung, A. K. L. J. Am. Chem. Soc. 2021, 143, 3037-3042.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 224. Selective Inhibition of DNA Polymerase b by a Covalent Inhibitor. Yuhas, S. C.; Laverty, D. J.; Lee, H.; Greenberg, M. M. J. Am. Chem. [&hellip;]<\/p>\n","protected":false},"author":124,"featured_media":0,"parent":7,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-890","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/pages\/890","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/users\/124"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/comments?post=890"}],"version-history":[{"count":5,"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/pages\/890\/revisions"}],"predecessor-version":[{"id":1309,"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/pages\/890\/revisions\/1309"}],"up":[{"embeddable":true,"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/pages\/7"}],"wp:attachment":[{"href":"https:\/\/sites.krieger.jhu.edu\/greenberg\/wp-json\/wp\/v2\/media?parent=890"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}